LINTRE ("linearized tree") program
by Naoko Takezaki (1995)
or METREE program by
A. Rzhetsky and M. Nei (1994)
NJBOOT2 ("bootstrap a neigbor-joining tree")
program by Koichiro Tamura (1993)
PHYLTEST ("four-cluster analysis")
program by Sudhir Kumar (1995)
STATIO ("testing stationarity of base composition")
program by A. Rzhetsky (1995)
rRNA-analysis programs (source files) by A. Rzhetsky (1995)
+ numerical optimization subroutines
by Z. Yang (1995)
with a model of nucleotide substitution") (1995)